Selected publications
| Year | Publications |
|---|---|
| 2025 | Building a Synthetic Cell Together Giaveri S, Abil Z, Kohyama S, Fu M, Levrier A, Adamala K, Chinantuya W, Dekker C, Deng N, Fredens J, Hagino K, Jahnke K, Li X, Lindner AB, Liu C, Majumder S, Noireaux V, Schwille P, and Westensee IN*. Nature Communications 2025:16:7488 |
| Accelerated evolution of whole gene clusters by an engineered lytic phage system in E. coli Ong S, Ghode P, Narenderan A, Willenborg F, Eden TV, Lao S, Marsh CO, Yew WS, and Fredens J*. bioRxiv | |
| 2023 | Continuous synthesis of E. coli genome sections and Mb-scale human DNA assembly Zürcher JF†, Kleefeldt AA†, Funke LFH†, Birnbaum J†, Fredens J†, Grazioli S, Liu KC, Spinck M, Petris G, Murat P, Rehm FBH, Sale JE, and Chin JW*. Nature 2023:619:555-562 |
| 2021 | Creating custom synthetic genomes in Escherichia coli with REXER and GENESIS Robertson WE†, Funke LFH†, Torre Ddl†, Fredens J†, Wang K*, and Chin JW*. Nature Protocols 2021:16:2345-2380 |
| Sense Codon Reassignment Enables Viral Resistance and Encoded Polymer Synthesis Robertson WE†, Funke LFH†, Torre Ddl†, Fredens J†, Elliott TS, Spinck M, Christova Y, Cervettini D, Böge FL, Liu KC, Buse S, Maslen S, Salmond GPC, and Chin JW*. Science 2021:372:1057-1062 | |
| 2019 | Total synthesis of Escherichia coli with a recoded genome Fredens J†, Wang K†, Torre Ddl†, Funke LFH†, Robertson WE†, Christova Y, Chia T, Schmied WH, Dunkelmann DL, Beránek V, Uttamapinant C, Llamazares AG, Elliott TS, and Chin JW*. Nature 2019:569:514-518 |
| 2016 | Defining synonymous codon compression schemes by genome recoding Wang K*, Fredens J†, Brunner SF†, Kim SH, Chia T, and Chin JW*. Nature 2016:539:59-64 |
| 2014 | Identification of Novel Protein Functions and Signaling Mechanisms by Genetics and Quantitative Phosphoproteomics in C. elegans Fredens J†, Engholm-Keller K†, Møller-Jensen J, Larsen MR, and Færgeman NJ*. Methods in Molecular Biology 2014:1188:107-24 |
| 2012 | Quantitative proteomics by amino acid labeling identifies novel NHR-49 regulated proteins in C. elegans Fredens J and Færgeman NJ*. Worm 2012:1:66-71. |
| 2011 | Quantitative proteomics by amino acid labeling in C. elegans Fredens J, Engholm-Keller K, Giessing A, Pultz D, Larsen MR, Højrup P, Møller-Jensen J, and Færgeman NJ*. Nature Methods 2011:8:845-847 |
| † Authors contributed equally | |
| * Corresponding authors |
