Publications

YearPublications
2023
Continuous synthesis of E. coli genome sections and Mb-scale human DNA assembly
Zürcher JF, Kleefeldt AA, Funke LFH, Birnbaum J, Fredens J, Grazioli S, Liu KC, Spinck M, Petris G, Murat P, Rehm FBH, Sale JE, and Chin JW.
Nature 2023:619:555-562.
2021
Creating custom synthetic genomes in Escherichia coli with REXER and GENESIS
Robertson WE, Funke LFH, Torre Ddl, Fredens J, Wang K, and Chin JW.
Nature Protocols 2021:16:2345-2380.
Sense Codon Reassignment Enables Viral Resistance and Encoded Polymer Synthesis
Robertson WE, Funke LFH, Torre Ddl, Fredens J, Elliott TS, Spinck M, Christova Y, Cervettini D, Böge FL, Liu KC, Buse S, Maslen S, Salmond GPC, and Chin JW.
Science 2021:372:1057-1062.
2019
Total synthesis of Escherichia coli with a recoded genome
Fredens J, Wang K, Torre Ddl, Funke LFH, Robertson WE, Christova Y, Chia T, Schmied WH, Dunkelmann DL, Beránek V, Uttamapinant C, Llamazares AG, Elliott TS, and Chin JW.
Nature 2019:569:514-518.
Axon-Dependent Patterning and Maintenance of Somatosensory Dendritic Arbors
Ramirez-Suarez NJ, Belalcazar HM, Salazar CJ, Beyaz B, Raja B, Nguyen KCQ, Celestrin K, Fredens J, Færgeman NJ, Hall DH, and Bülow HE.
Developmental Cell 2019:48:229-244.
2016
Defining synonymous codon compression schemes by genome recoding
Wang K, Fredens J, Brunner SF, Kim SH, Chia T, and Chin JW.
Nature 2016:539:59-64.
2014
Identification of Novel Protein Functions and Signaling Mechanisms by Genetics and Quantitative Phosphoproteomics in C. elegans
Fredens J, Engholm-Keller K, Møller-Jensen J, Larsen MR, and Færgeman NJ.
Methods in Molecular Biology 2014:1188:107-24.
2012
Quantitative proteomics by amino acid labeling identifies novel NHR-49 regulated proteins in C. elegans
Fredens J and Færgeman NJ.
Worm 2012:1:66-71.
A method for measuring fatty acid oxidation in C. elegans
Elle IC, Rødkær SV, Fredens J, and Færgeman NJ.
Worm 2012:1:26-30.
2011
Quantitative proteomics by amino acid labeling in C. elegans
Fredens J, Engholm-Keller K, Giessing A, Pultz D, Larsen MR, Højrup P, Møller-Jensen J, and Færgeman NJ.
Nature Methods 2011:8:845-847.
2008
Functional analysis of acyl-CoA binding proteins in Caenorhabditis elegans
Elle IC, Simonsen KT, Olsen L, Sørensen P, Fredens J, Tuck S, Færgeman NJ.
Chemistry and Physics of Lipids 2008:154:39.
C. elegans: A Model for Understanding Lipid Accumulation
Elle IC, Olsen LCB, Mosbech MB, Rødkær SV, Pultz D, Boelt SG, Fredens J, Sørensen P, and Færgeman NJ.
Lipid Insights 2008;1:13-21.